elastix::Simplex< TElastix > Class Template Reference

#include <elxSimplex.h>

Detailed Description

template<class TElastix>
class elastix::Simplex< TElastix >

An optimizer based on Simplex...

This optimizer is a wrap around the itk::AmoebaOptimizer. This wrap-around class takes care of setting parameters, and printing progress information. For detailed information about the optimisation method, please read the documentation of the itkAmoebaOptimizer (in the ITK-manual).

See also

ImprovedSimplexOptimizer

Definition at line 41 of file elxSimplex.h.

Inheritance diagram for elastix::Simplex< TElastix >:

Public Types
using	ConstPointer = itk::SmartPointer<const Self>
using	ITKBaseType = typename Superclass2::ITKBaseType
using	Pointer = itk::SmartPointer<Self>
using	Self = Simplex
using	Superclass1 = AmoebaOptimizer
using	Superclass2 = OptimizerBase<TElastix>
Public Types inherited from elastix::OptimizerBase< TElastix >
using	ElastixType
using	ITKBaseType = itk::Optimizer
using	ParametersType = typename ITKBaseType::ParametersType
using	RegistrationType
using	Self = OptimizerBase
using	Superclass = BaseComponentSE<TElastix>
Public Types inherited from elastix::BaseComponentSE< TElastix >
using	ElastixType = TElastix
using	RegistrationType = typename ElastixType::RegistrationBaseType
using	Self = BaseComponentSE
using	Superclass = BaseComponent

Public Member Functions
void	AfterEachIteration () override
void	AfterEachResolution () override
void	AfterRegistration () override
void	BeforeEachResolution () override
void	BeforeRegistration () override
	elxClassNameMacro ("Simplex")
virtual const char *	GetClassName () const
	ITK_DISALLOW_COPY_AND_MOVE (Simplex)
void	SetInitialPosition (const ParametersType &param) override
Public Member Functions inherited from elastix::OptimizerBase< TElastix >
void	AfterRegistrationBase () override
void	BeforeEachResolutionBase () override
ITKBaseType *	GetAsITKBaseType ()
const ITKBaseType *	GetAsITKBaseType () const
	ITK_DISALLOW_COPY_AND_MOVE (OptimizerBase)
virtual void	SetCurrentPositionPublic (const ParametersType &param)
virtual void	SetSinusScales (double amplitude, double frequency, unsigned long numberOfParameters)
Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
void	AddTargetCellToIterationInfo (const char *const name)
const Configuration *	GetConfiguration () const
ElastixType *	GetElastix () const
auto &	GetIterationInfoAt (const char *const name)
RegistrationType *	GetRegistration () const
	ITK_DISALLOW_COPY_AND_MOVE (BaseComponentSE)
void	RemoveTargetCellFromIterationInfo (const char *const name)
void	SetConfiguration (const Configuration *_arg)
void	SetElastix (ElastixType *_arg)
Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIterationBase ()
virtual void	AfterEachResolutionBase ()
virtual int	BeforeAll ()
virtual int	BeforeAllBase ()
virtual void	BeforeRegistrationBase ()
virtual const char *	elxGetClassName () const
const char *	GetComponentLabel () const
	ITK_DISALLOW_COPY_AND_MOVE (BaseComponent)
	itkTypeMacroNoParent (BaseComponent)
void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from elastix::BaseComponent
template<typename TBaseComponent >
static auto	AsITKBaseType (TBaseComponent *const baseComponent) -> decltype(baseComponent->GetAsITKBaseType())
static void	InitializeElastixExecutable ()
static bool	IsElastixLibrary ()

Protected Member Functions
	Simplex ()=default
	~Simplex () override=default
Protected Member Functions inherited from elastix::OptimizerBase< TElastix >
virtual bool	GetNewSamplesEveryIteration () const
	OptimizerBase ()=default
virtual void	SelectNewSamples ()
	~OptimizerBase () override=default
Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()=default
	~BaseComponentSE () override=default
Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()=default
virtual	~BaseComponent ()=default

Private Attributes
	elxOverrideGetSelfMacro

Additional Inherited Members
Protected Types inherited from elastix::OptimizerBase< TElastix >
using	SettingsVectorType = typename std::vector<SettingsType>
Static Protected Member Functions inherited from elastix::OptimizerBase< TElastix >
static void	PrintSettingsVector (const SettingsVectorType &settings)
Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
Configuration::ConstPointer	m_Configuration {}
itk::WeakPointer< TElastix >	m_Elastix {}
RegistrationType *	m_Registration {}

Member Typedef Documentation

ConstPointer

template<class TElastix >

using elastix::Simplex< TElastix >::ConstPointer = itk::SmartPointer<const Self>

Definition at line 53 of file elxSimplex.h.

ITKBaseType

template<class TElastix >

using elastix::Simplex< TElastix >::ITKBaseType = typename Superclass2::ITKBaseType

Definition at line 74 of file elxSimplex.h.

Pointer

template<class TElastix >

using elastix::Simplex< TElastix >::Pointer = itk::SmartPointer<Self>

Definition at line 52 of file elxSimplex.h.

Self

template<class TElastix >

using elastix::Simplex< TElastix >::Self = Simplex

Standard ITK.

Definition at line 49 of file elxSimplex.h.

Superclass1

template<class TElastix >

using elastix::Simplex< TElastix >::Superclass1 = AmoebaOptimizer

Definition at line 50 of file elxSimplex.h.

Superclass2

template<class TElastix >

using elastix::Simplex< TElastix >::Superclass2 = OptimizerBase<TElastix>

Definition at line 51 of file elxSimplex.h.

Constructor & Destructor Documentation

Simplex()

template<class TElastix >

elastix::Simplex< TElastix >::Simplex ( )

protecteddefault

~Simplex()

template<class TElastix >

elastix::Simplex< TElastix >::~Simplex ( )

overrideprotecteddefault

Member Function Documentation

AfterEachIteration()

template<class TElastix >

void elastix::Simplex< TElastix >::AfterEachIteration ( )

overridevirtual

Reimplemented from elastix::BaseComponent.

AfterEachResolution()

template<class TElastix >

void elastix::Simplex< TElastix >::AfterEachResolution ( )

overridevirtual

Reimplemented from elastix::BaseComponent.

AfterRegistration()

template<class TElastix >

void elastix::Simplex< TElastix >::AfterRegistration ( )

overridevirtual

Reimplemented from elastix::BaseComponent.

BeforeEachResolution()

template<class TElastix >

void elastix::Simplex< TElastix >::BeforeEachResolution ( )

overridevirtual

Reimplemented from elastix::BaseComponent.

BeforeRegistration()

template<class TElastix >

void elastix::Simplex< TElastix >::BeforeRegistration ( )

overridevirtual

Methods invoked by elastix, in which parameters can be set and progress information can be printed.

Reimplemented from elastix::BaseComponent.

elxClassNameMacro()

template<class TElastix >

elastix::Simplex< TElastix >::elxClassNameMacro

(

"Simplex< TElastix >"

)

Name of this class. Use this name in the parameter file to select this specific optimizer.
example: (Optimizer "Simplex")

GetClassName()

template<class TElastix >

virtual const char * elastix::Simplex< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from elastix::OptimizerBase< TElastix >.

ITK_DISALLOW_COPY_AND_MOVE()

template<class TElastix >

elastix::Simplex< TElastix >::ITK_DISALLOW_COPY_AND_MOVE

(

Simplex< TElastix >

)

New()

template<class TElastix >

static Pointer elastix::Simplex< TElastix >::New ( )

static

Method for creation through the object factory.

SetInitialPosition()

template<class TElastix >

void elastix::Simplex< TElastix >::SetInitialPosition ( const ParametersType & param )

override

Override the SetInitialPosition. Override the implementation in itkOptimizer.h, to ensure that the scales array and the parameters array have the same size.

Field Documentation

elxOverrideGetSelfMacro

template<class TElastix >

elastix::Simplex< TElastix >::elxOverrideGetSelfMacro

private

Definition at line 108 of file elxSimplex.h.