#include <itkMissingStructurePenalty.h>
Computes the (pseudo) volume of the transformed surface mesh of a structure.
.
Definition at line 44 of file itkMissingStructurePenalty.h.
Public Types | |
using | CellInterfaceType = typename MeshTraitsType::CellType |
using | ConstPointer = SmartPointer<const Self> |
using | CoordRepType = typename OutputPointType::CoordRepType |
using | DerivativeValueType |
using | DummyMeshPixelType = unsigned char |
using | FixedMeshConstPointer = typename FixedMeshType::ConstPointer |
using | FixedMeshContainerConstPointer = typename FixedMeshContainerType::ConstPointer |
using | FixedMeshContainerElementIdentifier = typename FixedMeshContainerType::ElementIdentifier |
using | FixedMeshContainerPointer = typename FixedMeshContainerType::Pointer |
using | FixedMeshContainerType = VectorContainer<MeshIdType, FixedMeshConstPointer> |
using | FixedMeshPointer = typename FixedMeshType::Pointer |
using | FixedMeshPointIdentifier = typename FixedMeshType::PointIdentifier |
using | FixedMeshType = Mesh<DummyMeshPixelType, FixedPointSetDimension, MeshTraitsType> |
using | InputPointType |
using | MappedMeshContainerConstPointer = typename MappedMeshContainerType::ConstPointer |
using | MappedMeshContainerPointer = typename MappedMeshContainerType::Pointer |
using | MappedMeshContainerType = VectorContainer<MeshIdType, FixedMeshPointer> |
using | MeshIdType = unsigned int |
using | MeshPointDataContainerConstIteratorType = typename FixedMeshType::PointDataContainerIterator |
using | MeshPointDataContainerConstPointer = typename FixedMeshType::PointDataContainerConstPointer |
using | MeshPointDataContainerIteratorType = typename MeshPointDataContainerType::Iterator |
using | MeshPointDataContainerPointer = typename FixedMeshType::PointDataContainerPointer |
using | MeshPointDataContainerType = typename FixedMeshType::PointDataContainer |
using | MeshPointsContainerConstIteratorType = typename FixedMeshType::PointsContainerConstIterator |
using | MeshPointsContainerConstPointer = typename MeshPointsContainerType::ConstPointer |
using | MeshPointsContainerIteratorType = typename FixedMeshType::PointsContainerIterator |
using | MeshPointsContainerPointer = typename MeshPointsContainerType::Pointer |
using | MeshPointsContainerType = typename FixedMeshType::PointsContainer |
using | MeshPointsDerivativeValueType = Array<DerivativeValueType> |
using | MeshPointType = typename FixedMeshType::PointType |
using | MeshTraitsType |
using | NonZeroJacobianIndicesType |
using | OutputPointType |
using | Pointer = SmartPointer<Self> |
using | Self = MissingVolumeMeshPenalty |
using | SubVectorType = itk::Vector<typename VectorType::ValueType, FixedPointSetDimension - 1> |
using | Superclass = SingleValuedPointSetToPointSetMetric<TFixedPointSet, TMovingPointSet> |
using | TransformJacobianType |
using | TransformParametersType |
using | TransformPointer |
using | TransformType |
using | VectorConstPointer = typename VectorType::const_pointer |
using | VectorType = typename FixedMeshType::PointType::VectorType |
using | VnlVectorType = vnl_vector<CoordRepType> |
Public Types inherited from itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet > | |
using | ConstPointer = SmartPointer<const Self> |
using | CoordinateRepresentationType = Superclass::ParametersValueType |
using | DerivativeValueType = typename DerivativeType::ValueType |
using | FixedImageMaskConstPointer = typename FixedImageMaskType::ConstPointer |
using | FixedImageMaskPointer = typename FixedImageMaskType::Pointer |
using | FixedImageMaskType = ImageMaskSpatialObject<Self::FixedPointSetDimension> |
using | FixedPointSetConstPointer = typename FixedPointSetType::ConstPointer |
using | FixedPointSetPixelType = typename FixedPointSetType::PixelType |
using | FixedPointSetType = TFixedPointSet |
using | InputPointType = typename TransformType::InputPointType |
using | MovingImageMaskConstPointer = typename MovingImageMaskType::ConstPointer |
using | MovingImageMaskPointer = typename MovingImageMaskType::Pointer |
using | MovingImageMaskType = ImageMaskSpatialObject<Self::MovingPointSetDimension> |
using | MovingPointSetConstPointer = typename MovingPointSetType::ConstPointer |
using | MovingPointSetPixelType = typename MovingPointSetType::PixelType |
using | MovingPointSetType = TMovingPointSet |
using | NonZeroJacobianIndicesType = typename TransformType::NonZeroJacobianIndicesType |
using | OutputPointType = typename TransformType::OutputPointType |
using | PointDataIterator = typename FixedPointSetType::PointDataContainer::ConstIterator |
using | Pointer = SmartPointer<Self> |
using | PointIterator = typename FixedPointSetType::PointsContainer::ConstIterator |
using | Self = SingleValuedPointSetToPointSetMetric |
using | Superclass = SingleValuedCostFunction |
using | TransformJacobianType = typename TransformType::JacobianType |
using | TransformParametersType = typename TransformType::ParametersType |
using | TransformPointer = typename TransformType::Pointer |
using | TransformType |
Public Member Functions | |
virtual const char * | GetClassName () const |
void | GetDerivative (const TransformParametersType ¶meters, DerivativeType &Derivative) const override |
virtual const FixedMeshContainerType * | GetFixedMeshContainer () |
MeasureType | GetValue (const TransformParametersType ¶meters) const override |
void | GetValueAndDerivative (const TransformParametersType ¶meters, MeasureType &Value, DerivativeType &Derivative) const override |
void | Initialize () override |
ITK_DISALLOW_COPY_AND_MOVE (MissingVolumeMeshPenalty) | |
itkGetModifiableObjectMacro (MappedMeshContainer, MappedMeshContainerType) | |
itkStaticConstMacro (FixedPointSetDimension, unsigned int, Superclass::FixedPointSetDimension) | |
itkStaticConstMacro (MovingPointSetDimension, unsigned int, Superclass::MovingPointSetDimension) | |
virtual void | SetFixedMeshContainer (const FixedMeshContainerType *_arg) |
virtual void | SetMappedMeshContainer (MappedMeshContainerType *_arg) |
Public Member Functions inherited from itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet > | |
virtual void | BeforeThreadedGetValueAndDerivative (const TransformParametersType ¶meters) const |
virtual const FixedImageMaskType * | GetFixedImageMask () |
virtual const FixedPointSetType * | GetFixedPointSet () |
virtual const MovingImageMaskType * | GetMovingImageMask () |
virtual const MovingPointSetType * | GetMovingPointSet () |
unsigned int | GetNumberOfParameters () const override |
virtual const TransformType * | GetTransform () |
virtual const bool & | GetUseMetricSingleThreaded () |
ITK_DISALLOW_COPY_AND_MOVE (SingleValuedPointSetToPointSetMetric) | |
itkStaticConstMacro (FixedPointSetDimension, unsigned int, TFixedPointSet::PointDimension) | |
itkStaticConstMacro (MovingPointSetDimension, unsigned int, TMovingPointSet::PointDimension) | |
virtual void | SetFixedImageMask (const FixedImageMaskType *_arg) |
virtual void | SetFixedPointSet (const FixedPointSetType *_arg) |
virtual void | SetMovingImageMask (const MovingImageMaskType *_arg) |
virtual void | SetMovingPointSet (const MovingPointSetType *_arg) |
virtual void | SetTransform (TransformType *_arg) |
void | SetTransformParameters (const ParametersType ¶meters) const |
virtual void | SetUseMetricSingleThreaded (bool _arg) |
virtual void | UseMetricSingleThreadedOff () |
virtual void | UseMetricSingleThreadedOn () |
Static Public Member Functions | |
static Pointer | New () |
Protected Member Functions | |
MissingVolumeMeshPenalty () | |
~MissingVolumeMeshPenalty () override=default | |
Protected Member Functions inherited from itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet > | |
void | PrintSelf (std::ostream &os, Indent indent) const override |
SingleValuedPointSetToPointSetMetric ()=default | |
~SingleValuedPointSetToPointSetMetric () override=default | |
Protected Attributes | |
FixedMeshConstPointer | m_FixedMesh {} |
FixedMeshContainerConstPointer | m_FixedMeshContainer {} |
MappedMeshContainerPointer | m_MappedMeshContainer {} |
Protected Attributes inherited from itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet > | |
FixedImageMaskConstPointer | m_FixedImageMask { nullptr } |
FixedPointSetConstPointer | m_FixedPointSet { nullptr } |
MovingImageMaskConstPointer | m_MovingImageMask { nullptr } |
MovingPointSetConstPointer | m_MovingPointSet { nullptr } |
unsigned int | m_NumberOfPointsCounted { 0 } |
TransformPointer | m_Transform { nullptr } |
bool | m_UseMetricSingleThreaded { true } |
Private Member Functions | |
void | SubVector (const VectorType &fullVector, SubVectorType &subVector, const unsigned int leaveOutIndex) const |
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::CellInterfaceType = typename MeshTraitsType::CellType |
Definition at line 94 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::ConstPointer = SmartPointer<const Self> |
Definition at line 54 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::CoordRepType = typename OutputPointType::CoordRepType |
Definition at line 76 of file itkMissingStructurePenalty.h.
using itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >::DerivativeValueType |
Definition at line 111 of file itkSingleValuedPointSetToPointSetMetric.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::DummyMeshPixelType = unsigned char |
Typedefs.
Definition at line 86 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::FixedMeshConstPointer = typename FixedMeshType::ConstPointer |
Definition at line 92 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::FixedMeshContainerConstPointer = typename FixedMeshContainerType::ConstPointer |
Definition at line 117 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::FixedMeshContainerElementIdentifier = typename FixedMeshContainerType::ElementIdentifier |
Definition at line 118 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::FixedMeshContainerPointer = typename FixedMeshContainerType::Pointer |
Definition at line 116 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::FixedMeshContainerType = VectorContainer<MeshIdType, FixedMeshConstPointer> |
Definition at line 115 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::FixedMeshPointer = typename FixedMeshType::Pointer |
Definition at line 93 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::FixedMeshPointIdentifier = typename FixedMeshType::PointIdentifier |
Definition at line 90 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::FixedMeshType = Mesh<DummyMeshPixelType, FixedPointSetDimension, MeshTraitsType> |
Definition at line 89 of file itkMissingStructurePenalty.h.
using itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >::InputPointType |
Definition at line 96 of file itkSingleValuedPointSetToPointSetMetric.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MappedMeshContainerConstPointer = typename MappedMeshContainerType::ConstPointer |
Definition at line 122 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MappedMeshContainerPointer = typename MappedMeshContainerType::Pointer |
Definition at line 121 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MappedMeshContainerType = VectorContainer<MeshIdType, FixedMeshPointer> |
Definition at line 120 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshIdType = unsigned int |
Definition at line 114 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointDataContainerConstIteratorType = typename FixedMeshType::PointDataContainerIterator |
Definition at line 111 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointDataContainerConstPointer = typename FixedMeshType::PointDataContainerConstPointer |
Definition at line 108 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointDataContainerIteratorType = typename MeshPointDataContainerType::Iterator |
Definition at line 112 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointDataContainerPointer = typename FixedMeshType::PointDataContainerPointer |
Definition at line 109 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointDataContainerType = typename FixedMeshType::PointDataContainer |
Definition at line 107 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointsContainerConstIteratorType = typename FixedMeshType::PointsContainerConstIterator |
Definition at line 104 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointsContainerConstPointer = typename MeshPointsContainerType::ConstPointer |
Definition at line 103 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointsContainerIteratorType = typename FixedMeshType::PointsContainerIterator |
Definition at line 105 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointsContainerPointer = typename MeshPointsContainerType::Pointer |
Definition at line 102 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointsContainerType = typename FixedMeshType::PointsContainer |
Definition at line 101 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointsDerivativeValueType = Array<DerivativeValueType> |
Definition at line 124 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshPointType = typename FixedMeshType::PointType |
Definition at line 96 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::MeshTraitsType |
Definition at line 87 of file itkMissingStructurePenalty.h.
using itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >::NonZeroJacobianIndicesType |
Typedefs for support of sparse Jacobians and compact support of transformations.
Definition at line 115 of file itkSingleValuedPointSetToPointSetMetric.h.
using itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >::OutputPointType |
Definition at line 97 of file itkSingleValuedPointSetToPointSetMetric.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::Pointer = SmartPointer<Self> |
Definition at line 53 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::Self = MissingVolumeMeshPenalty |
Standard class typedefs.
Definition at line 51 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::SubVectorType = itk::Vector<typename VectorType::ValueType, FixedPointSetDimension - 1> |
Definition at line 99 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::Superclass = SingleValuedPointSetToPointSetMetric<TFixedPointSet, TMovingPointSet> |
Definition at line 52 of file itkMissingStructurePenalty.h.
using itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >::TransformJacobianType |
Definition at line 99 of file itkSingleValuedPointSetToPointSetMetric.h.
using itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >::TransformParametersType |
Definition at line 98 of file itkSingleValuedPointSetToPointSetMetric.h.
using itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >::TransformPointer |
Definition at line 95 of file itkSingleValuedPointSetToPointSetMetric.h.
using itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >::TransformType |
More typedefs.
Definition at line 93 of file itkSingleValuedPointSetToPointSetMetric.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::VectorConstPointer = typename VectorType::const_pointer |
Definition at line 98 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::VectorType = typename FixedMeshType::PointType::VectorType |
Definition at line 97 of file itkMissingStructurePenalty.h.
using itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::VnlVectorType = vnl_vector<CoordRepType> |
Definition at line 77 of file itkMissingStructurePenalty.h.
|
protected |
|
overrideprotecteddefault |
|
virtual |
Run-time type information (and related methods).
Reimplemented from itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >.
Reimplemented in elastix::MissingStructurePenalty< TElastix >.
|
override |
Get the derivatives of the match measure.
|
virtual |
|
override |
Set the fixed mask. Get the fixed mask. Get the value for single valued optimizers.
|
override |
Get value and derivatives for multiple valued optimizers.
|
overridevirtual |
Initialize the Metric by making sure that all the components are present and plugged together correctly.
Reimplemented from itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >.
itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::ITK_DISALLOW_COPY_AND_MOVE | ( | MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet > | ) |
itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::itkGetModifiableObjectMacro | ( | MappedMeshContainer | , |
MappedMeshContainerType | ) |
itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::itkStaticConstMacro | ( | FixedPointSetDimension | , |
unsigned int | , | ||
Superclass::FixedPointSetDimension | ) |
Constants for the pointset dimensions.
itk::MissingVolumeMeshPenalty< TFixedPointSet, TMovingPointSet >::itkStaticConstMacro | ( | MovingPointSetDimension | , |
unsigned int | , | ||
Superclass::MovingPointSetDimension | ) |
|
static |
Type used for representing point components
Method for creation through the object factory.
|
virtual |
|
virtual |
|
private |
|
protected |
PrintSelf. Member variables.
Definition at line 167 of file itkMissingStructurePenalty.h.
|
mutableprotected |
Definition at line 169 of file itkMissingStructurePenalty.h.
|
mutableprotected |
Definition at line 170 of file itkMissingStructurePenalty.h.
Generated on 2024-07-17 for elastix by 1.11.0 (9b424b03c9833626cd435af22a444888fbbb192d) |