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Publications

 
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Papers in international journals | Conference proceedings | Book chapters | Abstracts | Theses
 

Papers in international journals

  • P. Mody, M. Huiskes, N. Chaves de Plaza, A. Onderwater, R. Lamsma, K. Hildebrandt, N. Hoekstra, E. Astreinidou, M. Staring and F. Dankers, "Large-scale dose evaluation of deep learning organ contours in head-and-neck radiotherapy by leveraging existing plans," Physics and Imaging in Radiation Oncology, vol. 30, pp. 100572, April 2024. click here
  • B.C. Stoel, M. Staring, M. Reijnierse and A.H.M. van der Helm-van Mil, "Deep Learning in Rheumatologic Image Interpretation," Nature Reviews Rheumatology, vol. 20, pp. 182 - 195, March 2024. click here
  • Y. Chen, M. Staring, O.M. Neve, S.R. Romeijn, E.F. Hensen, B.M. Verbist, J.M. Wolterink and Q. Tao, "CoNeS: Conditional neural fields with shift modulation for multi-sequence MRI translation," The Journal of Machine Learning for Biomedical Imaging, vol. 2, pp. 657 - 685, 2024. click here
  • N. Chaves-de-Plaza, P.P. Mody, M. Staring, R. van Egmond, A. Vilanova and K. Hildebrandt, "Inclusion Depth for Contour Ensembles," IEEE Transactions on Visualization and Computer Graphics, in press. click here
  • L. Beljaards, N. Pezzotti, C. Rao, M. Doneva, M.J.P. van Osch and M. Staring, "AI-Based Motion Artifact Severity Estimation in Undersampled MRI Allowing for Selection of Appropriate Reconstruction Models," Medical Physics, in press. click here
  • J. Jia, E.R. Marges, M.K. Ninaber, L.J.M. Kroft, A.A. Schouffoer, M. Staring and B.C. Stoel, "Automatic pulmonary function estimation from chest CT scans using deep regression neural networks: the relation between structure and function in systemic sclerosis," IEEE Access, vol. 11, pp. 135272 - 135282, November 2023. click here
  • O.M. Neve, S.R. Romeijn, Y. Chen, L. Nagtegaal, W. Grootjans, J.C. Jansen, M. Staring, B.M. Verbist and E.F. Hensen, "Automated 2-dimensional measurement of vestibular schwannoma: validity and accuracy of an artificial intelligence algorithm," Otolaryngology - Head and Neck Surgery, vol. 169, no. 6, pp. 1582 - 1589, December 2023. click here
  • Z. Zhai, G.J.A.M. Boon, M. Staring, et al., "Automated Quantification of the Pulmonary Vasculature in Pulmonary Embolism and Chronic Thromboembolic Pulmonary Hypertension," Pulmonary Circulation, vol. 13, no. 2, pp. e12223, 2023. click here
  • C.M.W. Goedmakers, L.M. Pereboom, J.W. Schoones, M.L. de Leeuw den Bouter, R.F. Remis, M. Staring and C.L.A. Vleggeert-Lankamp, "Machine learning for image analysis in the cervical spine: Systematic review of the available models and methods," Brain and Spine, vol. 2, pp. 101666, 2022. click here
  • O. Neve, Y. Chen, Q. Tao, et al., "Fully Automated 3D Vestibular Schwannoma Segmentation with and without Gadolinium Contrast: a multi-center, multi-vendor study," Radiology: Artificial Intelligence, vol. 4, no. 4, pp. e210300, 2022. click here
  • K. Koolstra, M. Staring, P. de Bruin and M.J.P. van Osch, "Subject-specific optimization of background suppression for arterial spin labeling MRI using a feedback loop on the scanner," NMR in Biomedicine, vol. 35, no. 9, pp. e4746, September 2022. click here
  • W.M. Brink, S. Yousefi, P. Bhatnagar, R.F. Remis, M. Staring and A.G. Webb, "Personalised Local SAR Prediction for Parallel Transmit Neuroimaging at 7T from a Single T1-weighted Dataset," Magnetic Resonance in Medicine, vol. 88, no. 1, pp. 464 - 475, July 2022. click here
  • J. Malimban, D. Lathouwers, H. Qian, F. Verhaegen, J. Wiedemann, S. Brandenburg and M. Staring, "Deep learning-based segmentation of the thorax in mouse micro-CT scans," Scientific Reports, vol. 12, no. 1, pp. 1822, 2022. click here
  • M.S. Elmahdy, L. Beljaards, S. Yousefi, H. Sokooti, F. Verbeek, U.A. van der Heide and M. Staring, "Joint Registration and Segmentation via Multi-Task Learning for Adaptive Radiotherapy of Prostate Cancer," IEEE Access, vol. 9, pp. 95551 - 95568, June 2021. click here
  • S. Yousefi, H. Sokooti, M.S. Elmahdy, I.M. Lips, M.T. Manzuri Shalmani, R.T. Zinkstok, F.J.W.M. Dankers, and M. Staring, "Esophageal Tumor Segmentation in CT Images using a Dilated Dense Attention Unet (DDAUnet)," IEEE Access, vol. 9, pp. 99235 - 99248, July 2021. click here
  • H. Sokooti, S. Yousefi, M.S. Elmahdy, B.P.F. Lelieveldt and M. Staring, "Hierarchical Prediction of Registration Misalignment using a Convolutional LSTM: Application to Chest CT Scans," IEEE Access, vol. 9, pp. 62008 - 62020, April 2021. click here
  • H.M. Luu, T. van Walsum, D. Franklin, P.C. Pham, L.D. Vu, A. Moelker, M. Staring, X. Van Hoang, W. Niessen and N.L. Trung, "Efficiently Compressing 3D Medical Images for Teleinterventions via CNNs and Anisotropic Diffusion," Medical Physics, vol. 48, no. 6, pp. 2877 - 2890, June 2021. click here
  • N. Pezzotti, S. Yousefi, M.S. Elmahdy, et al., "An Adaptive Intelligence Algorithm for Undersampled Knee MRI Reconstruction," IEEE Access, vol. 8, pp. 204825 - 204838, 2020. click here
  • H. Zhao, B.C. Stoel, M. Staring, M.E. Bakker, J. Stolk, P. Zhou and C. Xiao, "A framework for pulmonary fissure segmentation in 3D CT images using a directional derivative of plate filter," Signal Processing, vol. 173, pp. 107602, August 2020. click here
  • S. Yousefi, M.T. Manzuri Shalmani, J. Lin and M. Staring, "A Novel Motion Detection Method Using 3D Discrete Wavelet Transform," IEEE Transactions on Circuits and Systems for Video Technology, vol. 29, no. 12, pp. 3487 - 3500, December 2019. click here
  • R.P.J. van den Ende, E.M. Kerkhof, L.S. Rigter, M.E. van Leerdam, F.P. Peters, B. van Triest, M. Staring, C.A.M. Marijnen and U.A. van der Heide, "Feasibility of gold fiducial markers as a surrogate for GTV position in image-guided radiotherapy of rectal cancer," International Journal of Radiation Oncology, Biology, Physics, vol. 105, no. 5, pp. 1151 - 1159, December 2019. click here
  • Y. Qiao, T. Jagt, M. Hoogeman, B.P.F. Lelieveldt and M. Staring, "Evaluation of an open source registration package for automatic contour propagation in online adaptive intensity-modulated proton therapy of prostate cancer," Frontiers in Oncology, vol. 9, pp. 1297, November 2019. click here
  • Z. Zhai, M. Staring, M.K. Ninaber, J. de Vries-Bouwstra, A.A. Schouffoer, L.J. Kroft, J. Stolk and B.C. Stoel, "Pulmonary Vascular Morphology Associated with Gas Exchange in Systemic Sclerosis without Lung Fibrosis," Journal of Thoracic Imaging, vol. 34, no. 6, pp. 373 - 379, November 2019. click here
  • Y. Qiao, B.P.F. Lelieveldt and M. Staring, "An efficient preconditioner for stochastic gradient descent optimization of image registration," IEEE Transactions on Medical Imaging, vol. 38, no. 10, pp. 2314 - 2325, October 2019. click here
  • S. Bayer, Z. Zhai, M. Strumia, et al., "Registration of vascular structures using a hybrid mixture model," International Journal of Computer Assisted Radiology and Surgery, vol. 14, no. 9, pp. 1507 - 1516, September 2019. click here
  • Z. Zhai, M. Staring, I.H. Giron, W.J.H. Veldkamp, L.J. Kroft, M.K. Ninaber and B.C. Stoel, "Automatic quantitative analysis of pulmonary vascular morphology in CT images," Medical Physics, vol. 46, no. 9, pp. 3985 - 3997, September 2019. click here
  • M.S. Elmahdy, T. Jagt, R.T. Zinkstok, et al., "Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer," Medical Physics, vol. 46, no. 8, pp. 3329 - 3343, August 2019. click here
  • H. Sokooti, G. Saygili, B. Glocker, B.P.F. Lelieveldt and M. Staring, "Quantitative Error Prediction of Medical Image Registration using Regression Forests," Medical Image Analysis, vol. 56, no. 8, pp. 110 - 121, August 2019. click here
  • R.P.J. van den Ende, L.S. Rigter, E.M. Kerkhof, et al., "MRI visibility of gold fiducial markers for image-guided radiotherapy of rectal cancer," Radiotherapy & Oncology, vol. 132, no. 3, pp. 93 - 99, March 2019. click here
  • B. De Vos, F.F. Berendsen, M.A. Viergever, H. Sokooti, M. Staring and I. Išgum, "A Deep Learning Framework for Unsupervised Affine and Deformable Image Registration," Medical Image Analysis, vol. 52, no. 2, pp. 128 - 143, February 2019. click here
  • Z. Sun, Y. Qiao, B.P.F. Lelieveldt and M. Staring, "Integrating Spatial-Anatomical Regularization and Structure Sparsity into SVM: Improving Interpretation of Alzheimer's Disease Classification," NeuroImage, vol. 178, pp. 445 - 460, September 2018. click here
  • Z. Zhai, H. Ota, M. Staring, J. Stolk, K. Sugimura, K. Takase and B.C. Stoel, "Treatment Effect of Balloon Pulmonary Angioplasty in Chronic Thromboembolic Pulmonary Hypertension Quantified by Automatic Comparative Imaging in Computed Tomography Pulmonary Angiography," Investigative Radiology, vol. 53, no. 5, pp. 286 - 292, May 2018. click here
  • R. Shahzad, Q. Tao, O. Dzyubachyk, M. Staring, B.P.F. Lelieveldt and R.J. van der Geest, "Fully-Automatic Left Ventricular Segmentation from Long-Axis Cardiac Cine MR Scans," Medical Image Analysis, vol. 39, pp. 44 - 55, July 2017. click here
  • Z. Sun, M. van der Giessen, B.P.F. Lelieveldt and M. Staring, "Detection of conversion from mild cognitive impairment to Alzheimer's disease using longitudinal brain MRI," Frontiers in Neuroinformatics, vol. 11, pp. 16, February 2017. click here
  • O. Dzyubachyk, M. Staring, M. Reijnierse, B.P.F. Lelieveldt and R.J. van der Geest, "Inter-Station Intensity Standardization for Whole-Body MR Data," Magnetic Resonance in Medicine, vol. 77, no. 1, pp. 422 - 433, January 2017. click here
  • M.A. Viergever, J.B.A. Maintz, S. Klein, K. Murphy, M. Staring and J.P.W. Pluim, "A survey of medical image registration - under review," Medical Image Analysis, vol. 33, pp. 140 - 144, October 2016. click here
  • C. Xiao, B.C. Stoel, M.E. Bakker, Y. Peng, J. Stolk and M. Staring, "Pulmonary Fissure Detection in CT Images Using a Derivative of Stick Filter," IEEE Transactions on Medical Imaging, vol. 35, no. 6, pp. 1488 - 1500, June 2016. click here
  • G. Saygili, M. Staring and E.A. Hendriks, "Confidence Estimation for Medical Image Registration Based On Stereo Confidences," IEEE Transactions on Medical Imaging, vol. 35, no. 2, pp. 539 - 549, February 2016. click here
  • Y. Qiao, B. van Lew, B.P.F. Lelieveldt and M. Staring, "Fast Automatic Step Size Estimation for Gradient Descent Optimization of Image Registration," IEEE Transactions on Medical Imaging, vol. 35, no. 2, pp. 391 - 403, February 2016. click here
  • L. Hammelrath, S. Škokić, A. Khmelinskii, A. Hess, N. van der Knaap, M. Staring, B.P.F. Lelieveldt, D. Wiedermann and M. Hoehn, "Morphological maturation of the mouse brain: An in vivo MRI and histology investigation," NeuroImage, vol. 125, no. 15, pp. 144 - 152, January 2016. click here
  • R. Shahzad, O. Dzyubachyk, M. Staring, J. Kullberg, L. Johansson, H. Ahlström, B.P.F. Lelieveldt and R.J. van der Geest, "Automated Extraction and Labelling of the Arterial Tree from Whole-Body MRA Data," Medical Image Analysis, vol. 24, no. 1, pp. 28 - 40, August 2015. click here
  • M.K. Ninaber, J. Stolk, J. Smit, E.J. Le Roy, L.J.M. Kroft, M.E. Bakker, J.K. de Vries Bouwstra, A.A. Schouffoer, M. Staring and B.C. Stoel, "Lung Structure And Function Relation In Systemic Sclerosis: Application Of Lung Densitometry," European Journal of Radiology, vol. 84, no. 5, pp. 975 - 979, May 2015. click here
  • B.C. Stoel, H.A. Marquering, M. Staring, L.F. Beenen, C.H. Slump, Y.B. Roos and C.B. Majoie, "Automated brain computed tomographic densitometry of early ischemic changes in acute stroke," Journal of Medical Imaging, vol. 2, no. 1, pp. 014004, March 2015. click here
  • R.D. Rudyanto, S. Kerkstra, E.M. van Rikxoort, et al., "Comparing algorithms for automated vessel segmentation in Computed Tomography scans of the lung: The VESSEL12 study," Medical Image Analysis, vol. 18, no. 7, pp. 1217 - 1232, October 2014. click here
  • M. Staring, M.E. Bakker, J. Stolk, D.P. Shamonin, J.H.C. Reiber and B.C. Stoel, "Towards Local Progression Estimation of Pulmonary Emphysema using CT," Medical Physics, vol. 41, no. 2, pp. 021905-1 - 021905-13, February 2014. click here
  • D.P. Shamonin, E.E. Bron, B.P.F. Lelieveldt, M. Smits, S. Klein and M. Staring, "Fast Parallel Image Registration on CPU and GPU for Diagnostic Classification of Alzheimer's Disease," Frontiers in Neuroinformatics, vol. 7, no. 50, pp. 1-15, January 2014. click here
  • N. Baka, B.L. Kaptein, J.E. Giphart, M. Staring, M. de Bruijne, B.P.F. Lelieveldt and E. Valstar, "Evaluation of automated statistical shape model based knee kinematics from biplane fluoroscopy," Journal of Biomechanics, vol. 47, no. 1, pp. 122 - 129, January 2014. click here
  • L. Mengler, A. Khmelinskii, M. Diedenhofen, C. Po, M. Staring, B.P.F. Lelieveldt and M. Hoehn, "Brain maturation of the adolescent rat cortex and striatum: changes in volume and myelination," NeuroImage, vol. 84, no. 1, pp. 35-44, January 2014. click here
  • R. van 't Klooster, M. Staring, S. Klein, R.M. Kwee, M.E. Kooi, J.H.C. Reiber, B.P.F. Lelieveldt and R.J. van der Geest, "Automated registration of multispectral MR vessel wall images of the carotid artery," Medical Physics, vol. 40, no. 12, pp. 121904-1 - 121904-12, December 2013. click here
  • O. Dzyubachyk, J. Blaas, C.P. Botha, M. Staring, M. Reijnierse, J.L. Bloem, R.J. van der Geest and B.P.F. Lelieveldt, "Comparative Exploration of Whole-Body MR through Locally Rigid Transforms," International Journal of Computer Assisted Radiology and Surgery, vol. 8, no. 4, pp. 635 - 647, July 2013. click here
  • C. Xiao, M. Staring, Y. Wang, D.P. Shamonin and B.C. Stoel, "A Multiscale Bi-Gaussian Filter for Adjacent Curvilinear Structures Detection With Application to Vasculature Images," IEEE Transactions on Image Processing, vol. 22, no. 1, pp. 174 - 188, January 2013. click here
  • K. Murphy, B. van Ginneken, J.M. Reinhardt, et al., "Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge," IEEE Transactions on Medical Imaging, vol. 30, no. 11, pp. 1901 - 1920, November 2011. click here
  • C. Xiao, M. Staring, D.P. Shamonin, J.H.C. Reiber, J. Stolk and B.C. Stoel, "A Strain Energy Filter for 3D Vessel Enhancement with Application to Pulmonary CT Images," Medical Image Analysis, vol. 15, no. 1, pp. 112 - 124, February 2011. click here
  • K. Murphy, B. van Ginneken, S. Klein, M. Staring, M.A. Viergever and J.P.W. Pluim, "Semi-Automatic Construction of Reference Standards for Evaluation of Image Registration," Medical Image Analysis, vol. 15, no. 1, pp. 71 - 84, February 2011. click here
  • I. Išgum, A. Rutten, M. Prokop, M. Staring, S. Klein, J.P.W. Pluim, M.A. Viergever and B. van Ginneken, "Automated aortic calcium scoring on low-dose chest computed tomography," Medical Physics, vol. 37, no. 2, pp. 714 - 723, February 2010. click here
  • S. Klein*, M. Staring*, K. Murphy, M.A. Viergever and J.P.W. Pluim, "elastix: a toolbox for intensity-based medical image registration," IEEE Transactions on Medical Imaging, vol. 29, no. 1, pp. 196 - 205, January 2010. click here *In alphabetical order. Both authors contributed equally.
  • E.M. van Rikxoort, I. Išgum, Y. Arzhaeva, M. Staring, S. Klein, M.A. Viergever, J.P.W. Pluim and B. van Ginneken, "Adaptive Local Multi-Atlas Segmentation: Application to the Heart and the Caudate Nucleus," Medical Image Analysis, vol. 14, no. 1, pp. 39 - 49, February 2010. click here
  • M. Staring, U.A. van der Heide, S. Klein, M.A. Viergever and J.P.W. Pluim, "Registration of Cervical MRI Using Multifeature Mutual Information," IEEE Transactions on Medical Imaging, vol. 28, no. 9, pp. 1412 - 1421, September 2009. click here
  • I. Išgum, M. Staring, A. Rutten, M. Prokop, M.A. Viergever and B. van Ginneken, "Multi-Atlas-Based Segmentation With Local Decision Fusion - Application to Cardiac and Aortic Segmentation in CT Scans," IEEE Transactions on Medical Imaging, vol. 28, no. 7, pp. 1000 - 1010, July 2009. click here
  • S. Klein, J.P.W. Pluim, M. Staring and M.A. Viergever, "Adaptive Stochastic Gradient Descent Optimisation for Image Registration," International Journal of Computer Vision, vol. 81, no. 3, pp. 227 - 239, March 2009. click here
  • M. Staring, J.P.W. Pluim, B. de Hoop, S. Klein, B. van Ginneken, H. Gietema, G. Nossent, C. Schaefer-Prokop, S. van de Vorst and M. Prokop, "Image Subtraction Facilitates Assessment of Volume and Density Change in Ground-Glass Opacities in Chest CT," Investigative Radiology, vol. 44, no. 2, pp. 61 - 66, February 2009. click here
  • S. Klein, U.A. van der Heide, I.M. Lips, M. van Vulpen, M. Staring and J.P.W. Pluim, "Automatic Segmentation of the Prostate in 3D MR Images by Atlas Matching using Localised Mutual Information," Medical Physics, vol. 35, no. 4, pp. 1407 - 1417, April 2008. click here
  • M. Staring, S. Klein and J.P.W. Pluim, "Nonrigid Registration with Tissue-Dependent Filtering of the Deformation Field," Physics in Medicine and Biology, vol. 52, no. 23, pp. 6879 - 6892, December 2007. click here
  • S. Klein, M. Staring and J.P.W. Pluim, "Evaluation of Optimization Methods for Nonrigid Medical Image Registration using Mutual Information and B-splines," IEEE Transactions on Image Processing, vol. 16, no. 12, pp. 2879 - 2890, December 2007. click here
  • M. Staring, S. Klein and J.P.W. Pluim, "A Rigidity Penalty Term for Nonrigid Registration," Medical Physics, vol. 34, no. 11, pp. 4098 - 4108, November 2007. click here

Papers in conference proceedings

  • V. van der Valk, D. Atsma, R. Scherptong and M. Staring, "Joint optimization of a β-VAE for ECG task-specific feature extraction," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 14221, pp. 554 - 563, October 2023. click here
  • K. Ntatsis, N. Dekker, V. van der Valk, T. Birdsong, D. Zukic, S. Klein, M. Staring and M. McCormick, "itk-elastix: Medical image registration in Python," Proceedings of the 22nd Python in Science Conference, pp. 101 - 105, July 2023. click here
  • Y. Chen, M. Staring, J.M. Wolterink and Q. Tao, "Local implicit neural representations for multi-sequence MRI translation," IEEE International Symposium on Biomedical Imaging (ISBI), April 2023. click here
  • Y. Tan, P. Mody, V. van der Valk, M. Staring and J. van Gemert, "Analyzing Components of a Transformer under Different Data Scales in 3D Prostate CT Segmentation," SPIE Medical Imaging: Computer-Aided Diagnosis, Proceedings of SPIE, vol. 12464, pp. 1246408, February 2023. click here
  • P.P. Mody, N.F. Chaves-de-Plaza, K. Hildebrandt and M. Staring, "Improving Error Detection in Deep Learning based Radiotherapy Autocontours using Bayesian Uncertainty," Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, MICCAI workshop, Lecture Notes in Computer Science, vol. 13563, pp. 70 - 79, September 2022. click here
  • N. Chaves-de-Plaza, P.P. Mody, K. Hildebrandt, H. de Ridder, M. Staring and R. van Egmond, "Towards Fast and Robust AI-Infused Human-Centered Contouring Workflows For Adaptive Proton Therapy in the Head and Neck," European Chapter of the Human Factors and Ergonomics Society, April 2022. click here
  • J. Jia, M. Staring, I. Hernández Girón, L.J.M. Kroft, A.A. Schouffoer and B.C. Stoel, "Prediction of Lung CT Scores of Systemic Sclerosis by Cascaded Regression Neural Networks," SPIE Medical Imaging: Computer-Aided Diagnosis, Proceedings of SPIE, vol. 12033, pp. 1203338, February 2022. click here
  • P.P. Mody, N. Chaves-de-Plaza, K. Hildebrandt, R. van Egmond, A. Villanova and M. Staring, "Comparing Bayesian Models for Organ Contouring in Head and Neck Radiotherapy," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 12032, pp. 120320F, February 2022. click here
  • Y. Li, M.S. Elmahdy, M.S. Lew and M. Staring, "Transformation-Consistent Semi-Supervised Learning for Prostate CT Radiotherapy," SPIE Medical Imaging: Computer-Aided Diagnosis, Proceedings of SPIE, vol. 12033, pp. 120333O, February 2022. click here
  • P.M. Johnson, G. Jeong, K. Hammernik, et al., "Evaluation of the Robustness of Learned MR Image Reconstruction to Systematic Deviations Between Training and Test Data for the Models from the fastMRI Challenge," Machine Learning for Medical Image Reconstruction, MICCAI workshop, Lecture Notes in Computer Science, vol. 12964, pp. 25 - 34, October 2021. click here
  • J. Jia, Z. Zhai, M.E. Bakker, I. Hernández Girón, M. Staring and B.C. Stoel, "Multi-Task Semi-Supervised Learning for Pulmonary Lobe Segmentation," IEEE International Symposium on Biomedical Imaging (ISBI), pp. 1329 - 1332, April 2021. click here
  • L. Beljaards, M.S. Elmahdy, F. Verbeek and M. Staring, "A Cross-Stitch Architecture for Joint Registration and Segmentation in Adaptive Radiotherapy," Medical Imaging with Deep Learning, Proceedings of Machine Learning Research, vol. 121, pp. 62 - 74, July 2020. click here
  • M.S. Elmahdy, T. Ahuja, U.A. van der Heide and M. Staring, "Patient-Specific Finetuning of Deep Learning Models for Adaptive Radiotherapy in Prostate CT," IEEE International Symposium on Biomedical Imaging (ISBI), pp. 577 - 580, April 2020. click here
  • B.D. de Vos, B.H.M. van der Velden, J. Sander, K.G.A. Gilhuijs, M. Staring and I. Išgum, "Mutual information for unsupervised deep learning image registration," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 11313, pp. 11313OR, February 2020. click here
  • Z. Zhai, M. Staring, X. Zhou, et al., "Linking convolutional neural networks with graph convolutional networks: application in pulmonary artery-vein separation," Graph Learning in Medical Imaging, MICCAI workshop, Lecture Notes in Computer Science, vol. 11849, pp. 36 - 43, October 2019. click here
  • S. Yousefi, L. Hirschler, M. van der Plas, Mohamed Elmahdi, H. Sokooti, M.J.P. van Osch and M. Staring, "Fast Dynamic Perfusion and Angiography Reconstruction using an end-to-end 3D Convolutional Neural Network," Machine Learning for Medical Image Reconstruction, MICCAI workshop, Lecture Notes in Computer Science, vol. 11905, pp. 25 - 35, October 2019. click here
  • M.S. Elmahdy, J.M. Wolterink, H. Sokooti, I. Išgum and M. Staring, "Adversarial optimization for joint registration and segmentation in prostate CT radiotherapy," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 11769, pp. 366 - 374, October 2019. click here
  • K. Marstal, F. Berendsen, N. Dekker, M. Staring and S. Klein, "The Continuous Registration Challenge: Evaluation-As-A-Service for Medical Image Registration Algorithms," IEEE International Symposium on Biomedical Imaging (ISBI), pp. 1399 - 1402, April 2019. click here
  • Z. Zhai, M. Staring, H. Ota and B.C. Stoel, "Pulmonary vessel tree matching for quantifying changes in vascular morphology," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 11071, pp. 517 - 524, September 2018. click here
  • S. Yousefi, H. Sokooti, M.S. Elmahdy, F.P. Peters, M.T. Manzuri Shalmani, R.T. Zinkstok and M. Staring, "Esophageal Gross Tumor Volume Segmentation using a 3D Convolutional Neural Network," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 11073, pp. 343 - 351, September 2018. click here
  • M.S. Elmahdy, T. Jagt, M.S. Hoogeman, R. Zinkstok and M. Staring, "Evaluation of multi-metric registration for online adaptive proton therapy of prostate cancer," International Workshop on Biomedical Image Registration (WBIR), Lecture Notes in Computer Science, vol. 10883, pp. 94 - 104, June 2018. click here
  • P. Bhosale, M. Staring, Z. Al-Ars and F.F. Berendsen, "GPU-based stochastic-gradient optimization for non-rigid medical image registration in time-critical applications," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 10574, pp. 105740R, February 2018. click here
  • B.D. de Vos, F. Berendsen, M.A. Viergever, M. Staring and I. Išgum, "End-to-End Unsupervised Deformable Image Registration with a Convolutional Neural Network," Deep Learning in Medical Image Analysis Workshop at MICCAI, Lecture Notes in Computer Science, vol. 10553, pp. 204 - 212, September 2017. click here
  • H. Sokooti, B. de Vos, F. Berendsen, B.P.F. Lelieveldt, I. Išgum and M. Staring, "Nonrigid Image Registration Using Multi-Scale 3D Convolutional Neural Networks," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 10433, pp. 232 - 239, September 2017. click here
  • H. Sokooti, G. Saygili, B. Glocker, B.P.F. Lelieveldt and M. Staring, "Accuracy Estimation for Medical Image Registration Using Regression Forests," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 9902, pp. 107 - 115, October 2016. click here
  • K. Marstal, F. Berendsen, M. Staring and S. Klein, "SimpleElastix: A user-friendly, multi-lingual library for medical image registration," International Workshop on Biomedical Image Registration (WBIR), IEEE Conference on Computer Vision and Pattern Recognition Workshops, pp. 574 - 582, July 2016. click here
  • F. Berendsen, K. Marstal, S. Klein and M. Staring, "The design of SuperElastix - a unifying framework for a wide range of image registration methodologies," International Workshop on Biomedical Image Registration (WBIR), IEEE Conference on Computer Vision and Pattern Recognition Workshops, pp. 498 - 506, July 2016. click here
  • S. Uilkema, U.A. van der Heide, J. Sonke, M. Staring and J. Nijkamp, "MR-based contour propagation for rectal cancer patients," 18th International Conference on the use of Computers in Radiation Therapy, June 2016. click here
  • Z. Zhai, M. Staring and B.C. Stoel, "Lung vessel segmentation in CT images using graph cuts," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 9784, pp. 97842K - 97842K-8, February 2016. click here
  • Y. Qiao, Z. Sun, B.P.F. Lelieveldt and M. Staring, "A Stochastic Quasi-Newton Method for Non-rigid Image Registration," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 9350, pp. 297 - 304, September 2015. click here
  • Z. Sun, B.P.F. Lelieveldt and M. Staring, "Fast Linear Geodesic Shape Regression Using Coupled Logdemons Registration," IEEE International Symposium on Biomedical Imaging (ISBI), pp. 1276 - 1279, April 2015. click here
  • P.H. Kitslaar, R. van 't Klooster, M. Staring, B.P.F. Lelieveldt and R.J. van der Geest, "Segmentation of Branching Vascular Structures using Adaptive Subdivision Surface Fitting," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 9413, pp. 94133Z, February 2015. click here
  • N.N. Smit, B. Klein Haneveld, M. Staring, E. Eisemann, C.P. Botha and A. Vilanova, "RegistrationShop: An Interactive 3D Medical Volume Registration System," Eurographics Workshop on Visual Computing for Biology and Medicine, pp. 145 - 153, September 2014. click here
  • Y. Qiao, B.P.F. Lelieveldt and M. Staring, "Fast automatic estimation of the optimization step size for nonrigid image registration," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 9034, pp. 90341A, February 2014. click here
  • O. Dzyubachyk, R.J. van der Geest, M. Staring, P. Börnert, M. Reijnierse, J.L. Bloem and B.P.F. Lelieveldt, "Joint Intensity Inhomogeneity Correction for Whole-Body MR Data," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 8149, pp. 106 - 113, September 2013. click here
  • C. Xiao, M. Staring, J. Wang, D.P. Shamonin and B.C. Stoel, "A Derivative of Stick Filter for Pulmonary Fissure Detection in CT Images," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 8669, pp. 86690V, February 2013. click here
  • A. Khmelinskii, L. Mengler, P. Kitslaar, M. Staring, M. Hoehn and B.P.F. Lelieveldt, "A visualization platform for high-throughput, follow-up, co-registered multi-contrast MRI rat brain data," SPIE Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging, Proceedings of SPIE, vol. 8672, pp. 86721W, February 2013. click here
  • M. Agarwal, M.E. Bakker, E.A. Hendriks, B.C. Stoel, J.H.C. Reiber and M. Staring, "Local SIMPLE Multi Atlas-Based Segmentation Applied to Lung Lobe Detection on Chest CT," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 8314, pp. 831410, February 2012. click here
  • D.P. Shamonin, M. Staring, M.E. Bakker, C. Xiao, J. Stolk, J.H.C. Reiber and B.C. Stoel, "Automatic Lung Lobe Segmentation of COPD Patients using Iterative B-Spline Fitting," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 8314, pp. 83140W, February 2012. click here
  • X. Liang, R. Kotagiri, Q. Yang, M. Staring and A. Pitman, "Generating Coefficients for Regularization Terms in Nonrigid Registration of Contrast-Enhanced MRI," Medical Image Computing and Computer-Assisted Intervention, Workshop on Breast Image Analysis, pp. 1 - 8, September 2011. click here
  • M. Baiker, M. Staring, C.W.G.M. Löwik, J.H.C. Reiber and B.P.F. Lelieveldt, "Automated Registration of Whole-Body Follow-Up MicroCT Data of Mice," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 6892, pp. 516 - 523, September 2011. click here
  • S. Klein, M. Staring, P. Andersson and J.P.W. Pluim, "Preconditioned Stochastic Gradient Descent Optimisation for Monomodal Image Registration," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 6892, pp. 549 - 556, September 2011. click here
  • M.J. van der Bom, S. Klein, M. Staring, R. Homan, L.W. Bartels and J.P.W. Pluim, "Evaluation of optimization methods for intensity-based 2D-3D registration in x-ray guided interventions," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 7962, pp. 796223, February 2011. click here
  • T. Farago, H. Nikolov, S. Klein, J.H.C. Reiber and M. Staring, "Semi-Automatic Parallelisation for Iterative Image Registration with B-splines," Medical Image Computing and Computer-Assisted Intervention, High Performance workshop, September 2011. click here
  • M. Staring, S. Klein, J.H.C. Reiber, W.J. Niessen and B.C. Stoel, "Pulmonary Image Registration With elastix Using a Standard Intensity-Based Algorithm," Medical Image Computing and Computer-Assisted Intervention, Medical Image Analysis for the Clinic: A Grand Challenge, September 2010. click here
  • C. Xiao, M. Staring, D.P. Shamonin, J.H.C. Reiber, J. Stolk and B.C. Stoel, "A Strain Energy Filter for 3D Vessel Enhancement," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 6363, pp. 367 - 374, 2010. click here
  • A.E.H. Scheenstra, M. Muskulus, M. Staring, A.M.J.V. van den Maagdenberg, S. Verduyn Lunel, J.H.C. Reiber, L. van der Weerd and J. Dijkstra, "The 3D Moore-Rayleigh Test for the Quantitative Groupwise Comparison of MR Brain Images," Information Processing in Medical Imaging, Lecture Notes in Computer Science, vol. 5636, pp. 564 - 575, July 2009. click here
  • M. Staring, M.E. Bakker, D.P. Shamonin, J. Stolk, J.H.C. Reiber and B.C. Stoel, "Towards Local Estimation of Emphysema Progression Using Image Registration," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 7259, pp. 72590O, February 2009. click here
  • K. Murphy, B. van Ginneken, J.P.W. Pluim, S. Klein and M. Staring, "Semi-automatic Reference Standard Construction for Quantitative Evaluation of Lung CT Registration," Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science, vol. 5242, pp. 1006 - 1013, September 2008. click here
  • K. Murphy, B. van Ginneken, J.P.W. Pluim, S. Klein and M. Staring, "Quantitative Assessment of Registration in Thoracic CT," The First International Workshop on Pulmonary Image Analysis, pp. 203 - 211, September 2008. click here
  • E. van Rikxoort, I. Išgum, M. Staring, S. Klein and B. van Ginneken, "Adaptive local multi-atlas segmentation: application to heart segmentation in chest CT scans," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 6914, pp. 691407, February 2008. click here
  • S. Klein, U.A. van der Heide, M. Staring, A.N.T.J. Kotte, B.W. Raaymakers and J.P.W. Pluim, "Segmentation of the Prostate in MR images by Atlas Matching using Localised Mutual Information," XVth International Conference on the use of Computers in Radiation Therapy, vol. 2, pp. 585 - 589, June 2007. click here
  • S. Klein, U.A. van der Heide, B.W. Raaymakers, A.N.T.J. Kotte, M. Staring and J.P.W. Pluim, "Segmentation of the prostate in MR images by atlas matching," IEEE International Symposium on Biomedical Imaging (ISBI), pp. 1300 - 1303, April 2007. click here
  • M. Staring, S. Klein and J.P.W. Pluim, "Evaluation of a Rigidity Penalty Term for Nonrigid Registration," Workshop on Image Registration in Deformable Environments, pp. 41 - 50, September 2006. click here
  • S. Klein, M. Staring and J.P.W. Pluim, "A Comparison of Acceleration Techniques for Nonrigid Medical Image Registration," International Workshop on Biomedical Image Registration (WBIR), Lecture Notes on Computer Science, vol. 4057, pp. 151 - 159, July 2006. click here
  • M. Staring, S. Klein and J.P.W. Pluim, "Nonrigid Registration Using a Rigidity Constraint," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 6144, pp. 355 - 364, February 2006. click here
  • H.J. Noordmans, R. de Roode, M. Staring and R. Verdaasdonk, "Registration and analysis of in-vivo multi-spectral images for correction of motion and comparison in time," SPIE Photonics West: Multimodal Biomedical Imaging, Proceedings of SPIE, vol. 6081, pp. 35 - 43, January 2006. click here
  • M. Staring, S. Klein and J.P.W. Pluim, "Nonrigid Registration with Adaptive, Content-Based Filtering of the Deformation Field," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 5747, pp. 212 - 221, February 2005. click here
  • S. Klein, M. Staring and J.P.W. Pluim, "Comparison of gradient approximation techniques for optimisation of mutual information in nonrigid registration," SPIE Medical Imaging: Image Processing, Proceedings of SPIE, vol. 5747, pp. 192 - 203, February 2005. click here
  • J.C. Oostveen, A.A.C. Kalker and M. Staring, "Adaptive quantization watermarking," Security, Steganography, and Watermarking of Multimedia Contents VI, Proceedings of SPIE, vol. 5306, pp. 296 - 303, January 2004. click here
  • M. Staring, J.C. Oostveen and A.A.C. Kalker, "Optimal distortion compensation for quantization watermarking," International Conference on Image Processing, vol. 2, pp. 727 - 730, September 2003. click here

Book chapters

  • B.D. de Vos, H. Sokooti, M. Staring and I. Išgum, "Chapter 19 - Machine learning in image registration," In Alejandro F. Frangi, Jerry L. Prince and Milan Sonka (Eds.), Medical Image Analysis, chapter 19, pp. 501 - 515, The MICCAI Society book Series, 2024. click here

Abstracts

  • C. Rao, L. Beljaards, M. van Osch, M. Doneva, J. Meineke, C. Schülke, N. Pezzotti, E. de Weerdt and M. Staring, "Guided Multicontrast Reconstruction based on the Decomposition of Content and Style," International Society for Magnetic Resonance in Medicine, in press. click here
  • P. Mody, M. Huiskes, N. Chaves de Plaza, A. Onderwater, R. Lamsma, K. Hildebrandt, N. Hoekstra, E. Astreinidou, M. Staring and F. Dankers, "Dose evaluation using existing plan parameters of auto-contouring in head-and-neck radiotherapy," Radiotherapy and Oncology (ESTRO), in press. click here
  • C.M.W. Goedmakers, L.M. Pereboom, M.L. de Leeuw den Bouter, R.F. Remis, M. Staring and C.L.A. Vleggeert-Lankamp, "Deep Learning on Preoperative Radiographs for Clinical Success Prediction after Surgery for Cervical Degenerative Disease," Brain and Spine, vol. 3, pp. 101842, 2023. click here
  • J. Malimban, F. Ludwig, D. Lathouwers, M. Staring, F. Verhaegen and S. Brandenburg, "A simulation framework of the preclinical proton irradiation workflow," Particle Therapy Co-operative Group, June 2023. click here
  • C. Rao, J. Meineke, N. Pezzotti, M. Staring, M. van Osch and M. Doneva, "Analysis of the Discretization Error vs. Estimation Time Tradeoff of MRF Dictionary Matching and the Advantage of the Neural Net-based Approach," International Society for Magnetic Resonance in Medicine, June 2023. click here
  • Y. Dong, K. Koolstra, L. Beljaards, M. Staring, M.J.P. van Osch and P. Börnert, "Deep Learning Based Self-Navigated Diffusion Weighted Multi-Shot EPI with Supervised Denoising," International Society for Magnetic Resonance in Medicine, June 2023. click here
  • H. Lu, J.F. Juffermans, N. Pezzotti, M. Staring and H.J. Lamb, "Deep learning-based acceleration of Compressed SENSE Cardiac MR imaging - accelerating total scan-times and reducing the number of breath holds," Society for Cardiovascular Magnetic Resonance, January 2023. click here
  • L. Beljaards, N. Pezzotti, C. Schülke, M.J.P. van Osch and M. Staring, "The effect of intra-scan motion on AI reconstructions in MRI," Medical Imaging with Deep Learning, July 2022. click here
  • J. Malimban, D. Lathouwers, H. Qian, F. Verhaegen, J. Wiedemann, S. Brandenburg and M. Staring, "External validation of deep learning models for mouse thorax autocontouring," 5th Conference on Small Animal Precision Image-guided Radiotherapy, March 2022. click here
  • K. Koolstra, M. Staring, P. de Bruin and M.J.P. van Osch, "Subject-specific optimization of background suppression for arterial spin labeling MRI using a real-time feedback loop on the scanner," International Society for Magnetic Resonance in Medicine, May 2022. click here
  • W. Brink, M. Staring, R. Remis and A. Webb, "Fast Subject-Specific SAR and B1+ Prediction for PTx at 7T using only an Initial Localizer Scan," ISMRM, May 2022. click here
  • J. Malimban, D. Lathouwers, H. Qian, F. Verhaegen, J. Wiedemann, S. Brandenburg and M. Staring, "Autocontouring of the mouse thorax using deep learning," Radiotherapy and Oncology (ESTRO), May 2022. click here
  • K. Koolstra, M. Staring, P. de Bruin and M.J.P. van Osch, "Individually optimized ASL background suppression using a real-time feedback loop on the scanner," ESMRMB, October 2021. click here
  • O. Neve, Q. Tao, S. Romeijn, et al., "Fully Automated 3D Vestibular Schwannoma Segmentation: A multicentre multi-vendor study," European Society of Head and Neck Radiology (ESHNR), September 2021. click here
  • W. Brink, S. Yousefi, P. Bhatnagar, M. Staring, R. Remis and A. Webb, "Numerical Body Model Inference for Personalized RF Exposure Prediction in Neuroimaging at 7T," ISMRM, May 2021. click here
  • Q. Tao, S. Romeijn, O. Neve, et al., "Deep-Learning-based Detection and Segmentation of Vestibular Schwannoma: A Multi-Center and Multi-Vendor MRI Study," RSNA, November 2020. click here
  • Z. Zhai, H. Ota, M. Staring, J. Stolk, K. Sugimura, K. Takase and B.C. Stoel, "Response to balloon pulmonary angioplasty in treated versus untreated pulmonary arteries in CTEPH patients," European Congress of Radiology, March 2020. click here
  • S. Bayer, Z. Zhai, M. Strumia, et al., "Local topology preservation for vascular centerline matching using a hybrid mixture model," IEEE Nuclear Science Symposium and Medical Imaging Conference, October 2019. click here
  • S. Yousefi, H. Sokooti, L. Hirschler, M. van der Plas, L. Petitclerc, M. Staring and M.J.P. van Osch, "Reconstruction of Dynamic Perfusion and Angiography Images from Sub-sampled Hadamard Time-encoded ASL Data using Deep Convolutional Neural Networks," ESMRMB, vol. 32, no. 1, pp. S96 - S97, October 2019. click here
  • R.P.J. van den Ende, E.M. Kerkhof, L.S. Rigter, M. van Leerdam, F.P. Peters, B. van Triest, M. Staring, C.A.M. Marijnen and U.A. van der Heide, "Feasibility of gold fiducial markers as a surrogate for GTV position in image-guided radiotherapy of rectal cancer," American Association of Physicists in Medicine (AAPM), July 2019. click here
  • T. Jagt, S. Breedveld, R. van Haveren, R. Nout, E. Astreinidou, M. Staring, B. Heijmen and M. Hoogeman, "An automated replanning strategy for near real-time adaptive proton therapy," Particle Therapy Co-operative Group, June 2019. click here
  • T. Jagt, S. Breedveld, R. van Haveren, R. Nout, E. Astreinidou, M. Staring, B. Heijmen and M. Hoogeman, "Plan-library supported automated re-planning for online-adaptive IMPT of cervical cancer," Radiotherapy and Oncology (ESTRO), vol. 133, no. Supplement 1, pp. S38 - S39, April 2019. click here
  • M.S. Elmahdy, T. Jagt, R.T. Zinkstok, C.A.M. Marijnen, M. Hoogeman and M. Staring, "Deep learning improves robustness of contour propagation for online adaptive IMPT of prostate cancer," Radiotherapy and Oncology (ESTRO), vol. 133, no. Supplement 1, pp. S543-S544, April 2019. click here
  • K. Marstal, F. Berendsen, N. Dekker, M. Staring and S. Klein, "The Continuous Registration Challenge," 8th International Workshop on Biomedical Image Registration, June 2018. click here
  • R.P.J. van den Ende, L.S. Rigter, E.M. Kerkhof, et al., "EP-2115: MRI visibility of gold fiducial markers for image-guided radiotherapy for rectal cancer," Radiotherapy and Oncology, vol. 127, no. Supplement 1, pp. S1163 - S1164, April 2018. click here
  • E. Lens, T. Jagt, M. Hoogeman, M. Staring and D.R. Schaart, "OC-0082: Using prompt gamma emission profiles to monitor day-to-day dosimetric changes in proton therapy," Radiotherapy and Oncology, vol. 127, no. Supplement 1, pp. S40 - S41, April 2018. click here
  • Z. Zhai, H. Ota, M. Staring, J. Stolk, K. Sugimura, K. Takase and B.C. Stoel, "Treatment Effect of Balloon Pulmonary Angioplasty in CTEPH Quantified by Automatic Comparative Imaging in CTPA," RSNA, November 2017. click here
  • A. Bani Yassien, G. Gobadi, M. Staring, B. van Triest, D. Lambregts, A. Betgen, C.A.M. Marijnen and U.A. van der Heide, "T2-weighted MR image registration of rectal tumours and mesorectum during radiotherapy," European Congress of Radiology, March 2017. click here
  • R. Shahzad, O. Dzyubachyk, M. Staring, B.P.F. Lelieveldt and R.J. van der Geest, "Framework For Automatic Labelling Of Arterial Tree From WB-MRA," IEEE International Symposium on Biomedical Imaging (ISBI), April 2016. click here
  • L. Mengler, A. Khmelinskii, M. Diedenhofen, C. Po, M. Staring, B.P.F. Lelieveldt and M. Hoehn, "When is a young rat brain adult? Volume and myelination changes in cortex and striatum," European Molecular Imaging Meeting, May 2013. click here
  • R. van 't Klooster, M. Staring, S. Klein, R.M. Kwee, M.E. Kooi, J.H.C. Reiber, B.P.F. Lelieveldt and R.J. van der Geest, "Automatic Registration of Multispectral MR Vessel Wall Images of the Carotid Artery," International Society for Magnetic Resonance in Medicine, May 2012. click here
  • A. Khmelinskii, L. Mengler, P. Kitslaar, M. Staring, C. Po, J.H.C. Reiber, M. Hoehn and B.P.F. Lelieveldt, "Interactive system for exploration of multi-modal rat brain data," European Molecular Imaging Meeting, pp. 122, June 2011. click here
  • L. Mengler, A. Khmelinskii, C. Po, M. Staring, J.H.C. Reiber, B.P.F. Lelieveldt and M. Hoehn, "Juvenile development and ageing mediated changes in cortical structure and volume in the rat brain," European Molecular Imaging Meeting, pp. 160, June 2011. click here
  • M. Staring, J. Stolk, M.E. Bakker, D. Shamonin, H. Reiber and B.C. Stoel, "Local progression estimation of pulmonary emphysema using image matching," European Respiratory Society Annual Congress, September 2009. click here
  • M. Staring, J.P.W. Pluim, B. de Hoop, S. Klein and M. Prokop, "Subtraction Imaging for Improved Detection of Change in Ground Glass Nodules in Chest Computed Tomography," European Radiology Supplements, vol. 18, supplement 1, pp. 137 - 336, March 2008. click here

Theses

  • M.S. Elmahdy, "Deep learning for online adaptive radiotherapy," PhD thesis, Leiden University Medical Center, March 2022. click here
  • H. Sokooti, "Supervised Learning in Medical Image Registration," PhD thesis, Leiden University Medical Center, December 2021. click here
  • Z. Zhai, "Automatic Quantitative Analysis of Pulmonary Vessels in CT: Methods and Applications," PhD thesis, Leiden University Medical Center, March 2020. click here
  • Y. Qiao, "Fast optimization methods for image registration in adaptive radiation therapy," PhD thesis, Leiden University Medical Center, December 2017. click here
  • A. Khmelinskii, "Multi-modal small-animal imaging: image processing challenges and applications," PhD thesis, Leiden University Medical Center, October 2013. click here
  • M. Staring, "Intrasubject Registration for Change Analysis in Medical Imaging," PhD thesis, Utrecht University, October 2008. click here
  • M. Staring, "Analysis of Quantization based Watermarking," MSc thesis, University of Twente, Faculty of Applied Mathematics, December 2002. click here
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